Browse of TCMCG021C30552 protein

CDS

Accession Number	TCMCG021C30552
gbkey	CDS
Protein Id	XP_019703938.1
Location	complement(join(64761720..64762360,64764015..64764386,64764483..64765572,64766008..64766300,64766868..64766946,64767082..64767169,64767284..64767419,64767499..64767760,64769898..64771247,64771979..64772127,64772192..64772248,64773891..64774108,64778549..64778635,64778713..64779048,64779275..64779353,64781477..64781559,64781670..64781747,64784571..64784654,64784741..64784828,64784971..64785057,64785138..64785277,64785371..64785444,64787456..64787479))
Gene	LOC105040123
GeneID	105040123
Organism	Elaeis guineensis

Protein

Length	1964aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA268357
db_source	XM_019848379.2
Definition	mediator of RNA polymerase II transcription subunit 13 isoform X2 [Elaeis guineensis]

EGGNOG-MAPPER Annotation

COG_category	K
Description	Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko03021        [VIEW IN KEGG]
KEGG_ko	ko:K15164        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko04919        [VIEW IN KEGG] map04919        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0005215        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0006810        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008643        [VIEW IN EMBL-EBI] GO:0015144        [VIEW IN EMBL-EBI] GO:0016020        [VIEW IN EMBL-EBI] GO:0016021        [VIEW IN EMBL-EBI] GO:0022857        [VIEW IN EMBL-EBI] GO:0031224        [VIEW IN EMBL-EBI] GO:0034219        [VIEW IN EMBL-EBI] GO:0040034        [VIEW IN EMBL-EBI] GO:0044425        [VIEW IN EMBL-EBI] GO:0050789        [VIEW IN EMBL-EBI] GO:0050793        [VIEW IN EMBL-EBI] GO:0051119        [VIEW IN EMBL-EBI] GO:0051179        [VIEW IN EMBL-EBI] GO:0051234        [VIEW IN EMBL-EBI] GO:0051239        [VIEW IN EMBL-EBI] GO:0055085        [VIEW IN EMBL-EBI] GO:0065007        [VIEW IN EMBL-EBI] GO:0071702        [VIEW IN EMBL-EBI] GO:0090213        [VIEW IN EMBL-EBI] GO:2000026        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGTGGACGAATGTGTTCAGAATTGGAGAGCTTCAAGCAATTTCATGGTTCCAGTTTCTTCCATGTGATTCTGATCCAAACTCTCTACCTGAGAAAAGTTTAAAGGCAGAGCAGAAAGATGCTGCTACTCATCTGATTCTTTCAGCTCATCTGCAGTTACAAAATGAAGGCTTTCTCAGCACATGGACTAACTCCTTTGTTGGTCCATGGGACCCATCTCAGGGAGTGCACAACCCTGATGAGAAAATCAAGCTCTGGCTTTTTCTCCCTGGTCGTCACTCATCAATAATTGATACTGCTCAAGCTGCAGTATCCAGATTGAGAGTTGTGGGAAGTGGGCTGTGGCTAGCACCTGGTGATTCAGAAGAGGTTGCTCTTGCATTATCTCAGGCTTTAAGAAATTCTATAGAAAGAGCACTTAGAGGGTTTTCGTACGTGAGATTTGGAGATGTTTTCACAAGATGTCATCCTTTCACCCTAAATGGAAAAAGCTTTAGGAGAGCACAACCAACATTTGAGTTCATCTTTTCTGCCACAGAAGAAGCAATCTATGTGCATGCAATAATATCCGCAAAGCATATCCGGGGACTGTGCAGTGATGATATAGAAAGAATATCAAGGAATGGTTCCGTTCGTTCCACTCGTGAGGGACTCCCAGTTATTGTTGGTCCTAATGGAATGCGAGGTAGGCTTACTGGATGTTGTCCCAGTGATCTTGTGAAGCAAGTATATATCAGCAAGTCGAAGGTGTCAAATGGGTTTACAGTTGGTATGCCTTTCCCTGGTGCTCCATCATCTGGCTGCCAGTTCAGGGGGCAAAGTTGCTATGTTGAAGTCACCCTTGGCTGCCCTTCCGCTTGTGGTGACAAAGTTTTGGAATCGAATGGCAATCAAAGCAACAATGCCATCCATCCTCATACTGAAGAGTCTCATTTTTCATCTGTTGGAAAAGGCCAGCAGAAGCAGGGAACAATTGATCAGCTTCCGATTCTTGAAAGAACATTCATTTACCCAGCAGATGCTGTGGTAATTCCTATGATGCACAGAGCCTTTGCTCGATCTTCCGTCAAGAGATTCTGGCTGCAAAATTGGGTTGGAACATCAGCATTTGAGATGTGGCCACTATGGAATTTTTTGGGATCCTCTCGTATTGAGCAGTGTTTTGCATTTGGAAACACTTGCAGCAGTGGGCCCTTGGATGGAGTTGGAGGTGACTTTAGCAGTTTGAGACTGCAAAAACAATACAATAGCAGCAGTAACAGCATAACTAGTAGCATCAGCAGTGTGAGCGGTACATCCAGCGATAGTGAATATGCAGTGGCTGCTGGAGCTGGTGATCTTGAAGCCGATGCTGACTCTCTTACATGCAGACATTCTGGTCTCCAAACGTGCACGCACAGGCACAACAGAAACAGCTGGTCAACCAGGCACAGTTCCGCTGCAGGAGCAGCAAATGTTCAGGTTGGATCTCGTTGGGATTGGGATGACGACGACAGAGGCATTGGCATGGACATCCAAACGCTCCTCTCTGAGTTTGGAGATTTTGGTGACTTTTTTGAAAATGATGTCCTGGCTTTCGGTGAGCCTCCAGGTACTGCAGAGTCTCAAGCTCTTATTTTTCCAACTTCAGATTGTGGGGACATCAGTGGCAGCCCTATGGGAGGAATGGAAGTATCACATCAGAAACTCTCTCCTGTTGGGCTTGCATCTTTTGAGGGAATTAACCATCAATCTGTTGCACTTACAGAGGATACTAGAAACCAAAGTACAGAATTTACTAAGGATGCTAGGTCATCTGTTTTAGGAACCCATTCTTCAGCACCCTCAACAGGGAAGTTTGACTATCTGACAAAAGCTGAAGCCATGATGACATTTGCCCCAGAATATGCAGCAGTTGAGATGCCTGCTAGCGAGCTTCCGACGTCAATTTTTAAAAGCCCATACTTCCCTAGATCTAGAAAGGTTGAGAGTTCACATTCGAGCTCTGTTGCTTATGTGTATAATGCAGCACCACCTTCTCCTCGAACGATGACCTCAGAAGAAAAGCCTGAGATCTCAGCTAAACTCAAACTGGGTTCCATGGGGCATGGTGGGAATTCATCTTTTCAATCTTCAAAATTATACACACATGTACAAAGTGGGACAAAAAAGACTAACAAGAGATCAGTTAATGATGGTGTCCCTTCACGTGAAGTAGAGGTTCCATTCTCTATGTCCGGCATAAGTTCCTTAAGTACTGTCCCTACTCTCCAAAGGAAGAATGAAAACATGTTGGAGACAGCACATTTTCTGCTGTCTCTGAAGACCGTGCTTGCTACAGAACTTGAATCCATCATGTTCCAAGCTGCCATGTGTCGGATAAGACATACTTTATTATCTCTTAGCAATAAAGTTCCTATTGGGTTGAGGAGCGCTATATCAGATCTAGTCCAAAGTGATACAGGCACCAAATCAGACATTATGATCTGTAAATATGAGATAAAGAAGAAAGATAACATACCAGTCAGAATAGCTGGTGATAGTGATAGCGGAATGCATGATGGACCAGTTACTGCACAAGTGGGTGTTTGGCGATCGGTTGGAGCTCCTAAAGGAACAAAGTCTTCAATTACGCGCAATTCTGAAAATTCATCTTCTTTGCCTCTCAGTACATTGCATGATGAGAATTTAAATCTCTATGGACAAAGGCAACCTCTTCAGGATCTTCTTGATGCTCTGGCCTTGTTAGTTCAGCAATCTACTTCCTTCGTTGATGTCTCACTTGATACAGATGATGGTGATGGCTCCTATTGTTGGCTTGCACTACAAGAGCAGCGGAGGCGTGGATTTTCTTGTGGTCCATCTATGGTTCATGCAGGTTGTGGTGGACTTCTAGCCACATGCCATTCTGTGGATATTGCTGGCATTGACTTATTGGATCCACTTTCAGCTGATATTCAAGCATCATCTGTGATTAGTTTGCTCCAGTCAGATATAAAATTAGCCTTAAAATCTGCTTTCGGAAATTTGGATGGTCCACTATCTGCAATCGATTGGTGCAGGGGTCGTGGCCAATCAGGTGATTCGAAAGCTATGGGAGATGGATATTCTTTTCAGTGCACTGTAAGTGAAGCTAAAGATTCTTCAAGCACTGTAACCCTCACTGGAGAGCCAATTAGCCCACCTCAGTCTACTGCTGGTTCATCTTGCCTCAGAGAGGGAGCAAGAATTGATGAGTCATCTCAAAGGAGATCCAGCCAAGAGATATGCAATTCAGAGTCAGAACAACAAAAAGGCTATTGTCGTTTCAGGCCAACACCTACAATGCTCCCATTACCTTCTATACGTGTTGGGTATCAGGATGATTGGCTAGATATGCCAGCAAAGAATTTACAATTTTGGGAAAAGGGTCCTCTTGAACCTTATGCTTCACCGAAGCCAATTATTTTCTATGCCTTATGTCCAGATATTGATCTCCTTGCTTCTGCTGCTGCCGAATTTTTTCAACAGTTAGGAACCATTTATGAAGCATGCAAGCTAGGAACACATTCACCTCAAATAGGTGGACAGATGGACCCATCCTTGGCAAGATATTTACCTTCTGGCCTTGTTCTTGTTGATTGCCCTCAACAAGTGAAGATTGCCAGCAATCATATTACTGCTATCAGCTCAATACGTGATTATTTTTTGGCACTTTCCAAAGGTTGGAATGTGAAGAACTTCATTAAGTCTCTTACAAAGGTTATCAAGGAACTGAAACTTGCTCCGAATTTGTCAATAAATCAAAAAGAAGGAAGTAGTGGGCCTTGTACGGTAGTTTATGTTGTATGTCCCTTCCCTGAGCCTAGGGCAGTTCTACAAACACTGATTGAGTGTGCCAGTGCTCTTGGATCGTTGGTTCTGTCACCAGACAAAGAGAGACGATCTCTATTACAATCTCATGTTGCTAGGGCCTTAAACTGTACTGCTGCTGCAGATGAAGCATCGGCATCAAATGTTGTAATGCTCTCAGGGTTCAGTATTCCTAAGCTTGTTTTGCAGATTGTTACTGTGGAATCCTTGCTACGGATCAACAGGCCAACTAATGAGGTCGCCATTTTGAAGGACATCGCGTTCACAGTATACAATAAGGCTCGACGAATCGCATGGGCTGCTCCTGCCTCTGACATGCTTCAGTCATCAGCTGCCTCAGGGCGATCTCAATCCACATTGATGCATGTAACTTCTCCTATTCCAGGCCTGTGGAAGGACTGCCATGCTTCTCGGTTACCTGGAGCAACTCTTGCAAGAGAGGCCGAACTTGATTCTGCCTTAAGACCTGGCACTTGGGATAACTCATGGCAAACATCAAGGGGTGCAGGGTTAACTTGCGAACCAAATAGACCAGTAGACTTATGTGGTCAGGATGACACAAGGTACATGTTTGAACCACTTTTTATATTGGCAGAACCCAGCTCCATAGAGCATGGAACCCCTTCCACTGTGTTTGGTAGTGCAGTGTCCGAGACTTCAAGTTTAAAATCTGTTATTGATGACAGTGGCATGTATATGCAAAGTTCATCTTCTGGAGTGAATGCAGATATTGGAACAACCTCCCTGCTTGATGGATCGGAGCATGACTCTAAAACAGCAGGTCTTCATTGTTGTTATGGGTGGACTGAGGATTGGCGCTGGCTAGTCTGCATCTGGACAGACTCTAGAGGAGAGTTGCTTGACAGTTGCATATTTCCCTTTGGTGGCATCAGTAGCCGCCAAGACACAAAAGTTCTCCAAAGCCTTTTTGTCCAGATTCTGCAACAGGGCTGTCAAATATTATTATGTTCATCCACTGATTCTGCTACTGCCAAGCCAAGGGACATAATAATCACACGTTTTGGATGTTTCTTTGAGCTTGAATGTCAAGAATGGCAAAAAGCTATCTACTCAGTTGGCGGCAATGAAGTCAAGAAATGGCCTTTACAACTGCGGCGGTCCATGCCTGATGGCATTCCCTCGACAACTAATGGGACTTCTCTGCAGCAGCAGGAATTGGGTTTAATTCAAGACAGAAACCTACTCTCCTCACCTAGCCCTTCTTTGTACAGTCCTCATTCCAAGTCCAGCTTCATTAAAGGTGGTCTGGCTCAATCTAGCACCAAAAAACAGCTCTTAGCAGGACAGACAGGTGTAGATAGCCCAAGGGGGTTGTTGCAATGGGTGCAGAGCATCAGTTTAATTGGAGTTTCCATTGATCATTCGTTGCATCTAATTCTTCAGGCAGATATGTCTTTCGCCGGTGGAGGATCTCATAGCAGCAGCAGCTCAAGCCTTTCAGGCTACTTAGAAGGATTCACTCCGGTGAGGTCTCTAGGAGGGTCTATGCAGGAACCTTATCTCCTAATCCCCTCGCCTAGTTTGCGCCACCTACCTCCAACACCCTTGCAACTTCCCACATGCCTGACTTCAGAGTCTCCGCCCCTTGCCCATCTTTTGCATAGCAAAGGGTCTGCAATTCCCCTGGCGACGGGATATGTTGTTTCCAAAGCGGTCCCAACCATGAGAAAAGATCCAGCAGAGTTGACAAAGGAAGATTGGCCTTCTATTCTTGCAGTCAGCCTTGTTGATCACTACGGACGCAACAATAACAGCATCCAAGAAAAGATGGTCCGAGGTGCTGGTAACATCACTATTGGTAAGCAAGGTAGGAGTTTGACTCCGGAGGTCATCAGTAGAGACTGTGAGACAGAGACTCATTTGGTTTTAGAGTCTGTAGCAGCTGAGCTTCACTCTCTTTCTTGGATGACTGCAAGTCCGGTGTACCTTGAAAGGCGCACTGCACTACCTTTTCACTGCGACATGCTTCTAAGACTAAGAAGGCTACTGCACTATGCGGATAAAGAGTTTTCTCGGCCACCAGAGAAGACACTGCAAGCTTAG

Protein:   MWTNVFRIGELQAISWFQFLPCDSDPNSLPEKSLKAEQKDAATHLILSAHLQLQNEGFLSTWTNSFVGPWDPSQGVHNPDEKIKLWLFLPGRHSSIIDTAQAAVSRLRVVGSGLWLAPGDSEEVALALSQALRNSIERALRGFSYVRFGDVFTRCHPFTLNGKSFRRAQPTFEFIFSATEEAIYVHAIISAKHIRGLCSDDIERISRNGSVRSTREGLPVIVGPNGMRGRLTGCCPSDLVKQVYISKSKVSNGFTVGMPFPGAPSSGCQFRGQSCYVEVTLGCPSACGDKVLESNGNQSNNAIHPHTEESHFSSVGKGQQKQGTIDQLPILERTFIYPADAVVIPMMHRAFARSSVKRFWLQNWVGTSAFEMWPLWNFLGSSRIEQCFAFGNTCSSGPLDGVGGDFSSLRLQKQYNSSSNSITSSISSVSGTSSDSEYAVAAGAGDLEADADSLTCRHSGLQTCTHRHNRNSWSTRHSSAAGAANVQVGSRWDWDDDDRGIGMDIQTLLSEFGDFGDFFENDVLAFGEPPGTAESQALIFPTSDCGDISGSPMGGMEVSHQKLSPVGLASFEGINHQSVALTEDTRNQSTEFTKDARSSVLGTHSSAPSTGKFDYLTKAEAMMTFAPEYAAVEMPASELPTSIFKSPYFPRSRKVESSHSSSVAYVYNAAPPSPRTMTSEEKPEISAKLKLGSMGHGGNSSFQSSKLYTHVQSGTKKTNKRSVNDGVPSREVEVPFSMSGISSLSTVPTLQRKNENMLETAHFLLSLKTVLATELESIMFQAAMCRIRHTLLSLSNKVPIGLRSAISDLVQSDTGTKSDIMICKYEIKKKDNIPVRIAGDSDSGMHDGPVTAQVGVWRSVGAPKGTKSSITRNSENSSSLPLSTLHDENLNLYGQRQPLQDLLDALALLVQQSTSFVDVSLDTDDGDGSYCWLALQEQRRRGFSCGPSMVHAGCGGLLATCHSVDIAGIDLLDPLSADIQASSVISLLQSDIKLALKSAFGNLDGPLSAIDWCRGRGQSGDSKAMGDGYSFQCTVSEAKDSSSTVTLTGEPISPPQSTAGSSCLREGARIDESSQRRSSQEICNSESEQQKGYCRFRPTPTMLPLPSIRVGYQDDWLDMPAKNLQFWEKGPLEPYASPKPIIFYALCPDIDLLASAAAEFFQQLGTIYEACKLGTHSPQIGGQMDPSLARYLPSGLVLVDCPQQVKIASNHITAISSIRDYFLALSKGWNVKNFIKSLTKVIKELKLAPNLSINQKEGSSGPCTVVYVVCPFPEPRAVLQTLIECASALGSLVLSPDKERRSLLQSHVARALNCTAAADEASASNVVMLSGFSIPKLVLQIVTVESLLRINRPTNEVAILKDIAFTVYNKARRIAWAAPASDMLQSSAASGRSQSTLMHVTSPIPGLWKDCHASRLPGATLAREAELDSALRPGTWDNSWQTSRGAGLTCEPNRPVDLCGQDDTRYMFEPLFILAEPSSIEHGTPSTVFGSAVSETSSLKSVIDDSGMYMQSSSSGVNADIGTTSLLDGSEHDSKTAGLHCCYGWTEDWRWLVCIWTDSRGELLDSCIFPFGGISSRQDTKVLQSLFVQILQQGCQILLCSSTDSATAKPRDIIITRFGCFFELECQEWQKAIYSVGGNEVKKWPLQLRRSMPDGIPSTTNGTSLQQQELGLIQDRNLLSSPSPSLYSPHSKSSFIKGGLAQSSTKKQLLAGQTGVDSPRGLLQWVQSISLIGVSIDHSLHLILQADMSFAGGGSHSSSSSSLSGYLEGFTPVRSLGGSMQEPYLLIPSPSLRHLPPTPLQLPTCLTSESPPLAHLLHSKGSAIPLATGYVVSKAVPTMRKDPAELTKEDWPSILAVSLVDHYGRNNNSIQEKMVRGAGNITIGKQGRSLTPEVISRDCETETHLVLESVAAELHSLSWMTASPVYLERRTALPFHCDMLLRLRRLLHYADKEFSRPPEKTLQA